Author Archives: Danilo Roccatano

About Danilo Roccatano

I have a Doctorate in chemistry at the University of Roma “La Sapienza”. I led educational and research activities at different universities in Italy, The Netherlands, Germany and now in the UK. I am fascinated by the study of nature with theoretical models and computational. For years, my scientific research is focused on the study of molecular systems of biological interest using the technique of Molecular Dynamics simulation. I have developed a server (the link is in one of my post) for statistical analysis at the amino acid level of the effect of random mutations induced by random mutagenesis methods. I am also very active in the didactic activity in physical chemistry, computational chemistry, and molecular modeling. I have several other interests and hobbies as video/photography, robotics, computer vision, electronics, programming, microscopy, entomology, recreational mathematics and computational linguistics.

Molekulare Maschinen: Die Coronavirus SARS-CoV-2 Bedrohung, Teil I.

Was Freunde mit und für uns tun, ist auch ein Erlebtes; denn es stärkt und fördert unsere Persönlichkeit. Was Feinde gegen uns unternehmen, erleben wir nicht, wir erfahren’s nur, lehnen’s ab und schützen uns dagegen wie gegen Frost, Sturm, Regen … Continue reading

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Le Macchine Molecolari: La minaccia de Coronavirus SARS-CoV-2

Difficilmente è vinto colui che sa conoscere le forze sue e quelle del nemico. Nicollò Machiavelli in Dell’arte della guerra (1519-1520) Un virus è la vita nella forma più semplice. È la riduzione minimalista di un organismo ai suoi elementi … Continue reading

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Modelling Natural Shapes: (Easter) Eggs 2020

One year ago, I wrote an article about the modelling of the egg shapes, promising at one point to come back on the topics. A next step in studying eggs shapes is to look to real one or a copy … Continue reading

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Nanoparticles in Biology and Medicine

I am very pleased to announce that the second edition of the book Nanoparticles in Biology and Medicine edited by Enrico Ferrari, Mikhail Soloviev is now out. This fully updated volume presents a wide range of methods for synthesis, surface … Continue reading

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Molecular Machines: the Coronavirus SARS-CoV-2 Menace

“If you know the enemy and know yourself, you need not fear the result of a hundred battles. If you know yourself but not the enemy, for every victory gained you will also suffer a defeat. If you know neither … Continue reading

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The Particle in a Box I: the Schrödinger Equation in One-dimension

In 1926, the Austrian physicist Erwin Schrödinger (1887-1961) made a fundamental mathematical discovery that had a profound impact on the study of the molecular world (in 1933, Schrödinger was awarded with the Nobel prize in Physics just 7 years later … Continue reading

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Buon Natale e Felice Anno Nuovo

Gentilissimi/e Lettori e Lettrici, Dear Reader, Sehr geehrte Leserinnen und Leser, Grazie mille per aver fatto tappa durante le vostre peregrinazioni cibernautiche nel mio sito web e per dedicare un po’ del vostro tempo nel leggere i miei articoli. Spero … Continue reading

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A personal tribute to the founder of MD simulation of biological molecules: Prof Herman J.C. Berendsen (1934-2019)

On the 7 October 2019, Prof Dr Herman Johan Christiaan Berendsen passed away just shortly after his 85 birthday. Prof Berendsen is considered the founder of the molecular dynamics simulation of biological system: the area of theoretical research that also … Continue reading

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The First 150 Years of the Periodic Table of the Elements

That the nobility of man, acquired in a hundred centuries of trial and error, lay in making himself the conquerer of matter, and that I had enrolled in chemistry because I wanted to remain faithful to this nobility. That conquering matter is … Continue reading

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Retro programming nostalgia III: the MSX Microcomputer and the Orbit of the Planets in the Solar System

In a recent article, I have explained the Euler’s method for solving ordinary differential equations using as a motivation the fictionalized version in the film Hidden Figures of the scientific contribution of Katherine Goble and her two colleagues to the NASA … Continue reading

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